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  5. Pnu_g31928

Pnu_g31928 (HRE2)


Aliases : HRE2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g31928

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00218200 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF015... 0.03 OrthoFinder output from all 47 species
AMTR_s00068p00102110 RAP2.11,... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00176570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00119770 RAP2.2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
AT1G03800 ATERF10, ERF10 ERF domain protein 10 0.02 OrthoFinder output from all 47 species
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G53910 RAP2.12 related to AP2 12 0.03 OrthoFinder output from all 47 species
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G72360 HRE1 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G05410 DREB2A, DREB2 DRE-binding protein 2A 0.02 OrthoFinder output from all 47 species
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G13330 Rap2.6L related to AP2 6l 0.04 OrthoFinder output from all 47 species
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g00499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08073 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Als_g20815 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Als_g36155 Rap2.6L not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04116 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aop_g17847 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene05675.t1 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene21088.t1 Aspi01Gene21088 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29677.t1 PUCHI, Aspi01Gene29677 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49734.t1 HRE2, Aspi01Gene49734 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55263.t1 RAP2.11, Aspi01Gene55263 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65526.t1 TINY2, Aspi01Gene65526 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0168.g054644 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g23893 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.10G018900.1 ERF2, ATERF2,... subgroup ERF-VI transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g09321 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dcu_g23766 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02414 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g22214 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g25390 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
GSVIVT01017572001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
Gb_03645 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
LOC_Os01g73770.1 CBF4, DREB1D,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g45450.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.02 OrthoFinder output from all 47 species
LOC_Os02g54050.1 LOC_Os02g54050 Ethylene-responsive transcription factor ERF018... 0.03 OrthoFinder output from all 47 species
LOC_Os07g22730.1 ERF1, ATERF1,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g36920.1 RRTF1, LOC_Os08g36920 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Len_g02180 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Len_g54846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_120531g0010 ATERF-9, ERF9, ATERF9 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Mp4g22280.1 CRF1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g11100.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g22598 CRF3 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38462 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g44895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c10_17870V3.1 Pp3c10_17870 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c1_5010V3.1 Pp3c1_5010 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c5_810V3.1 Pp3c5_810 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g10469 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006108 No alias not classified & original description: CDS=1-567 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013429 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g06091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15417 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc03g093540.1.1 Solyc03g093540 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc03g093550.1.1 Solyc03g093550 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g051360.3.1 ABR1, Solyc04g051360 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc06g082590.1.1 CRF4, Solyc06g082590 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g16486 RAP2.11 transcription factor *(ERN1) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g39331 LEP not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e014008_P002 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026989_P001 ERF110, Zm00001e026989 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e027350_P001 ATERF12, ERF12,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e031783_P001 ERF110, Zm00001e031783 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e035811_P001 PUCHI, Zm00001e035811 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004150 dihydroneopterin aldolase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 29 77
No external refs found!