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  5. Pnu_g32530

Pnu_g32530


Description : not classified & original description: none


Gene families : OG0000231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g32530
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT1G10880 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
AT2G19160 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
AT5G25330 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
Aob_g13322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03792 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g68321 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G008800.1 Ceric.05G008800 not classified & original description: pacid=50579184... 0.03 OrthoFinder output from all 47 species
Ehy_g18271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008319001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01008321001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01010878001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01011858001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g07880.1 LOC_Os02g07880 no description available(sp|q65xs5|bc10_orysj : 174.0) 0.02 OrthoFinder output from all 47 species
LOC_Os04g51794.2 LOC_Os04g51794 no description available(sp|q65xs5|bc10_orysj : 176.0) 0.02 OrthoFinder output from all 47 species
LOC_Os10g08280.1 LOC_Os10g08280 no description available(sp|q65xs5|bc10_orysj : 134.0) 0.02 OrthoFinder output from all 47 species
MA_10432974g0010 No alias no description available(sp|q65xs5|bc10_orysj : 98.6) 0.02 OrthoFinder output from all 47 species
MA_112910g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_112910g0020 No alias no description available(sp|q65xs5|bc10_orysj : 127.0) 0.03 OrthoFinder output from all 47 species
MA_11883g0010 No alias no description available(sp|q65xs5|bc10_orysj : 160.0) 0.02 OrthoFinder output from all 47 species
MA_28957g0010 No alias no description available(sp|q65xs5|bc10_orysj : 129.0) 0.02 OrthoFinder output from all 47 species
MA_4521g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g13010.1 No alias no description available(sp|q65xs5|bc10_orysj : 174.0) 0.02 OrthoFinder output from all 47 species
Mp8g13670.1 No alias no description available(sp|q65xs5|bc10_orysj : 104.0) 0.02 OrthoFinder output from all 47 species
Ore_g38028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g086550.3.1 Solyc02g086550 no description available(sp|q65xs5|bc10_orysj : 491.0) 0.03 OrthoFinder output from all 47 species
Solyc03g119260.4.1 Solyc03g119260 no description available(sp|q65xs5|bc10_orysj : 145.0) 0.02 OrthoFinder output from all 47 species
Solyc03g121280.4.1 Solyc03g121280 no description available(sp|q65xs5|bc10_orysj : 145.0) 0.03 OrthoFinder output from all 47 species
Zm00001e013168_P002 Zm00001e013168 no description available(sp|q65xs5|bc10_orysj : 192.0) 0.02 OrthoFinder output from all 47 species
Zm00001e024826_P001 Zm00001e024826 no description available(sp|q65xs5|bc10_orysj : 127.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016757 glycosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 104 272
No external refs found!