Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000215_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g33886 | |
| Cluster | HCCA: Cluster_34 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G27710 | No alias | 60S acidic ribosomal protein family | 0.03 | OrthoFinder output from all 47 species | |
| AT2G27720 | No alias | 60S acidic ribosomal protein family | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g098496 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g130035 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g18468 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g24527 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g17968 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g06840 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16922 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18711 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g20569 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21465 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Aop_g21466 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Aop_g21538 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g29386 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18132.t1 | Aspi01Gene18132 | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g50883 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g78022 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cre02.g143050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03976 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g28530 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g29583 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g44019 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g31970 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01031366001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033814001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01034757001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_39007 | No alias | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g06260.1 | No alias | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g08160.1 | No alias | component RPP2 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g18620.1 | No alias | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22542 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g32439 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c1_27060V3.1 | Pp3c1_27060 | 60S acidic ribosomal protein family | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10174 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g10605 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g26180 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Ppi_g27556 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g33808 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g23852 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g23854 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g34267 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g40093 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g46778 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g48423 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Smo139397 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g009447.1.1 | Solyc01g009447 | component RPP2 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g067100.2.1 | Solyc11g067100 | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g37475 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12451 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006597_P001 | Zm00001e006597 | component RPP2 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e026591_P001 | Zm00001e026591 | component RPP2 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e026592_P001 | Zm00001e026592 | component RPP2 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e026593_P001 | Zm00001e026593 | component RPP2 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e041900_P001 | Zm00001e041900 | component RPP2 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030145 | manganese ion binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
