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  5. Cpa|evm.model.tig00000142.8

Cpa|evm.model.tig00000142.8


Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SPF31 pre-mRNA splicing factor


Gene families : OG0000220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000142.8

Target Alias Description ECC score Gene Family Method Actions
Aev_g31830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G075500.1 Ceric.20G075500 heavy chain of Dynein microtubule-based motor protein... 0.01 OrthoFinder output from all 47 species
Ceric.25G028800.1 Ceric.25G028800 heavy chain of Dynein microtubule-based motor protein... 0.01 OrthoFinder output from all 47 species
Cre03.g145127 No alias Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder output from all 47 species
Cre06.g250300 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre09.g392282 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre09.g403800 No alias Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder output from all 47 species
Cre11.g476050 No alias Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder output from all 47 species
Mp2g07870.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.02 OrthoFinder output from all 47 species
Mp4g14660.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.01 OrthoFinder output from all 47 species
Pnu_g23794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_1970V3.1 Pp3c17_1970 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c20_6270V3.1 Pp3c20_6270 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c22_18220V3.1 Pp3c22_18220 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c22_18230V3.1 Pp3c22_18230 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c22_18240V3.1 Pp3c22_18240 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c23_17280V3.1 Pp3c23_17280 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c6_28550V3.1 Pp3c6_28550 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c7_8280V3.1 Pp3c7_8280 No annotation 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015235 No alias heavy chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR024743 Dynein_HC_stalk 1002 1124
IPR004273 Dynein_heavy_D6_P-loop 1718 1798
IPR001623 DnaJ_domain 2182 2241
IPR035706 AAA_9 1223 1388
IPR024317 Dynein_heavy_chain_D4_dom 771 812
IPR024317 Dynein_heavy_chain_D4_dom 661 769
No external refs found!