Description : External stimuli response.temperature.Csd (cold-shock-domain) protein
Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000169.17 | |
| Cluster | HCCA: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G38680 | ATCSP2, GRP2, CSDP2, CSP2 | glycine rich protein 2 | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene15575.t1 | ATCSP2, GRP2,... | cold-responsive mRNA chaperone *(CSD) & original... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g69745 | No alias | cold-responsive mRNA chaperone *(CSD) & original... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006743 | ubiquinone metabolic process | IEP | HCCA |
| BP | GO:0006744 | ubiquinone biosynthetic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| CC | GO:0019866 | organelle inner membrane | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | HCCA |
| BP | GO:0042181 | ketone biosynthetic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| CC | GO:0070469 | respirasome | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:1901661 | quinone metabolic process | IEP | HCCA |
| BP | GO:1901663 | quinone biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002059 | CSP_DNA-bd | 24 | 85 |
| No external refs found! |
