No description available
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000215.127 | |
| Cluster | HCCA: Cluster_51 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G58680 | No alias | ARM repeat superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g08532 | PUB13, ATPUB13 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene59240.t1 | PUB14, ATPUB14,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0579.g078276 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: CDS=173-2116 | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01011767001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01032778001 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os06g51130.1 | PUB15, LOC_Os06g51130 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| MA_129765g0010 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g36544 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Solyc06g051090.3.1 | ATPUB17, PUB17,... | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000225 | Armadillo | 86 | 124 |
| No external refs found! |
