Cpa|evm.model.tig00000241.175 (XRN3, AtXRN3)

Aliases : XRN3, AtXRN3

Description : 5-3 exoribonuclease 3 OS=Arabidopsis thaliana

Gene families : OG0000769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000769_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000241.175
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
AT5G42540	XRN2, AtXRN2	exoribonuclease 2	0.01	OrthoFinder output from all 47 species
Dac_g23449	EIN5, AIN1, XRN4, ATXRN4	exoribonuclease *(XRN4) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g45506	XRN3, AtXRN3	exoribonuclease *(XRN4) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g049010.3.1	EIN5, AIN1,...	EBF-modulating exoribonuclease (EIN5/XRN4)....	0.02	OrthoFinder output from all 47 species
Spa_g17366	EIN5, AIN1, XRN4, ATXRN4	exoribonuclease *(XRN4) & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	53	68
IPR004859	Xrn1_N	1	46

External Links

No external refs found!