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  5. Cpa|evm.model.tig00000293.10

Cpa|evm.model.tig00000293.10 (PGP11)


Aliases : PGP11

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000293.10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00128080 evm_27.TU.AmTr_v1... Putative multidrug resistance protein OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Aob_g22201 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G047700.1 Ceric.36G047700 not classified & original description: pacid=50569224... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000025.1 ATPGP4, PGP4, ABCB4, MDR4 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Ehy_g31851 ABCB19,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_18150 PGP13 auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Gb_29989 PGP9 ABC transporter B family member 9 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_3437g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Ore_g04820 PGP20 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g27278 No alias subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g30508 PGP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo229984 No alias Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Spa_g00479 PGP20 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e001258_P003 PGP20, Zm00001e001258 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e038462_P002 PGP20, Zm00001e038462 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 396 532
IPR011527 ABC1_TM_dom 694 965
IPR011527 ABC1_TM_dom 78 334
IPR003439 ABC_transporter-like_ATP-bd 1141 1290
No external refs found!