Cpa|evm.model.tig00000367.45 (XI-6, ATMYA2, XI-2, MYA2)

Aliases : XI-6, ATMYA2, XI-2, MYA2

Description : Myosin-6 OS=Arabidopsis thaliana

Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000367.45
Cluster	HCCA: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00219460	XI-8, XI-B, XIB, ATXIB	Cytoskeleton.microfilament network.myosin...	0.01	OrthoFinder output from all 47 species
AT1G04600	XIA, ATXIA	myosin XI A	0.02	OrthoFinder output from all 47 species
AT2G33240	ATXID, XID	myosin XI D	0.01	OrthoFinder output from all 47 species
AT5G20470	No alias	myosin, putative	0.01	OrthoFinder output from all 47 species
Als_g45511	ATXIK, XI-17, XIK	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene01430.t1	ATXIK, XI-17,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0027.g023600	ATVIIIA, VIIIA	not classified & original description: CDS=1-2967	0.02	OrthoFinder output from all 47 species
Ceric.08G044300.1	ATVIIIA, VIIIA,...	not classified & original description: pacid=50638897...	0.02	OrthoFinder output from all 47 species
Ceric.21G040400.1	ATVIIIA, VIIIA,...	class VIII myosin microfilament-based motor protein &...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020614.58	XI-8, XI-B, XIB, ATXIB	Myosin-8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021108.13	XIF, ATMYO5, ATXIF	Myosin-9 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Cre13.g563800	ATXIK, XI-17, XIK	Myosin-12 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os03g64290.1	XI-8, XI-B, XIB,...	class XI myosin microfilament-based motor protein	0.01	OrthoFinder output from all 47 species
LOC_Os05g46030.1	ATXIK, XI-17,...	Myosin-17 OS=Arabidopsis thaliana (sp\|f4k5j1\|myo17_arath...	0.01	OrthoFinder output from all 47 species
Len_g29954	XI-15, ATXI-I, XI-I	class XI myosin microfilament-based motor protein &...	0.04	OrthoFinder output from all 47 species
MA_10426662g0010	ATM1	Myosin-1 OS=Arabidopsis thaliana (sp\|q9lhe9\|myo1_arath : 242.0)	0.01	OrthoFinder output from all 47 species
Solyc07g063590.4.1	ATMYOS1, ATM4,...	class VIII myosin microfilament-based motor protein	0.01	OrthoFinder output from all 47 species
Solyc10g006820.4.1	ATMYOS1, ATM4,...	class VIII myosin microfilament-based motor protein	0.01	OrthoFinder output from all 47 species
Solyc11g006220.2.1	ATXIE, XIE,...	class XI myosin microfilament-based motor protein	0.02	OrthoFinder output from all 47 species
Zm00001e012626_P001	ATVIIIA, VIIIA,...	class VIII myosin microfilament-based motor protein	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016459	myosin complex	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000796	condensin complex	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
BP	GO:0007076	mitotic chromosome condensation	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0030261	chromosome condensation	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001609	Myosin_head_motor_dom	63	286
IPR001609	Myosin_head_motor_dom	310	508

External Links

No external refs found!

Cpa|evm.model.tig00000367.45 (XI-6, ATMYA2, XI-2, MYA2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation