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  5. Cpa|evm.model.tig00000430.62

Cpa|evm.model.tig00000430.62


Description : Cytoskeleton.microfilament network.actin organisation.CAP1 regulator protein


Gene families : OG0005404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000430.62

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g34780.1 CAP1, ATCAP1,... CAP1 actin organisation regulator protein 0.02 OrthoFinder output from all 47 species
Sam_g48221 No alias regulatory protein *(CAP1) of actin organisation &... 0.02 OrthoFinder output from all 47 species
Solyc10g051340.2.1 CAP1, ATCAP1,... CAP1 actin organisation regulator protein 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR013912 Adenylate_cyclase-assoc_CAP_C 287 443
IPR013992 Adenylate_cyclase-assoc_CAP_N 13 278
No external refs found!