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  5. Cpa|evm.model.tig00000455.16

Cpa|evm.model.tig00000455.16


No description available


Gene families : OG0006569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000455.16
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT5G54600 No alias Translation protein SH3-like family protein 0.03 OrthoFinder output from all 47 species
Adi_g019582 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g04734 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aob_g39352 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010426 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Cba_g02325 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Cre16.g652550 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Gb_13209 No alias 50S ribosomal protein L24, chloroplastic OS=Spinacia... 0.01 OrthoFinder output from all 47 species
LOC_Os06g46930.1 LOC_Os06g46930 component psRPL24 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Len_g05147 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Lfl_g05272 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Mp3g07850.1 No alias component psRPL24 of large ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species
Nbi_g00588 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Pir_g07148 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016787 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Solyc07g063960.3.1 Solyc07g063960 component psRPL24 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Spa_g00224 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Tin_g02402 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e013043_P001 Zm00001e013043 component psRPL24 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR003256 Ribosomal_L24 89 122
No external refs found!