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  5. Cpa|evm.model.tig00000473.16

Cpa|evm.model.tig00000473.16


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000473.16
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.79 ORF158 No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000158.98 No alias No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000405.12 No alias No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000448.80 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000658.17 ORF158 No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000658.19 No alias No description available 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000788.14 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000788.15 No alias No description available 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.52 ORF158 No description available 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.12 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001231.8 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020510.80 ORF158 No description available 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.15 No alias No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020675.48 ORF158 No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020934.18 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.58 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.119 ORF158 No description available 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021374.27 No alias No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021374.28 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021518.13 ORF158 No description available 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021571.43 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 1148 1250
IPR000477 RT_dom 285 429
No external refs found!