Aliases : UBP15
Description : Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease
Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000663.67 | |
| Cluster | HCCA: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00092p00168980 | UBP25,... | Protein degradation.peptidase families.cysteine-type... | 0.01 | OrthoFinder output from all 47 species | |
| AT5G57990 | UBP23 | ubiquitin-specific protease 23 | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g013897 | UBP25 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g013899 | UBP25 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g080212 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g19936 | UBP25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g01298 | UBP25 | deubiquitinase *(UBP25) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G086800.1 | UBP23, Ceric.13G086800 | deubiquitinase *(UBP23) & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.28G067600.1 | UBP23, Ceric.28G067600 | deubiquitinase *(UBP23) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Cre14.g629300 | UBP23 | Protein degradation.peptidase families.cysteine-type... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g32712 | UBP23 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31799 | UBP19 | deubiquitinase *(UBP15-21) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01038082001 | UBP25 | Protein degradation.peptidase families.cysteine-type... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g43480.1 | UBP25, LOC_Os05g43480 | deubiquitinase (UBP25) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10823 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_10431488g0010 | UBP23 | deubiquitinase (UBP23) | 0.02 | OrthoFinder output from all 47 species | |
| MA_842793g0010 | UBP23 | Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14457 | UBP25 | deubiquitinase *(UBP25) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g15993 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27850 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g01994 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g05280 | UBP25 | deubiquitinase *(UBP25) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g08804 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g20105 | UBP19 | deubiquitinase *(UBP15-21) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c21_10760V3.1 | UBP23, Pp3c21_10760 | ubiquitin-specific protease 23 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g08769 | UBP25 | deubiquitinase *(UBP25) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g09289 | No alias | deubiquitinase *(UBP23) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e036315_P001 | UBP23, Zm00001e036315 | deubiquitinase (UBP23) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0016579 | protein deubiquitination | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| MF | GO:0008483 | transaminase activity | IEP | HCCA |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | HCCA |
| MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
| MF | GO:0016778 | diphosphotransferase activity | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001394 | Peptidase_C19_UCH | 99 | 400 |
| No external refs found! |
