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  5. Cpa|evm.model.tig00000704.69

Cpa|evm.model.tig00000704.69


No description available


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000704.69
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT4G01230 No alias Reticulon family protein 0.02 OrthoFinder output from all 47 species
AT4G11220 RTNLB2, BTI2 VIRB2-interacting protein 2 0.02 OrthoFinder output from all 47 species
Adi_g015887 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Adi_g021347 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Adi_g075111 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Adi_g113947 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Ala_g24666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03537 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001609 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Dac_g31897 No alias nucleotidyl transferase component *(TRL) of TRAMP... 0.02 OrthoFinder output from all 47 species
Ehy_g03409 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ehy_g04440 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Gb_33890 No alias ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
LOC_Os02g16620.1 RTNLB2, BTI2,... ER-associated protein (Reticulon) 0.01 OrthoFinder output from all 47 species
LOC_Os03g56900.1 LOC_Os03g56900 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
LOC_Os04g29920.1 LOC_Os04g29920 ER-associated protein (Reticulon) 0.01 OrthoFinder output from all 47 species
LOC_Os05g24770.1 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
LOC_Os06g30750.1 RTNLB2, BTI2,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Pir_g04726 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Pp3c3_26340V3.1 RTNLB3, Pp3c3_26340 Reticulon family protein 0.01 OrthoFinder output from all 47 species
Sam_g20069 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Solyc01g095200.3.1 Solyc01g095200 ER-associated protein (Reticulon) 0.01 OrthoFinder output from all 47 species
Spa_g46867 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Spa_g48899 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Zm00001e014238_P002 RTNLB2, BTI2,... ER-associated protein (Reticulon) 0.06 OrthoFinder output from all 47 species
Zm00001e027185_P001 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.01 OrthoFinder output from all 47 species
Zm00001e031369_P001 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.01 OrthoFinder output from all 47 species
Zm00001e038234_P001 Zm00001e038234 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 72 221
No external refs found!