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  5. Cpa|evm.model.tig00000711.67

Cpa|evm.model.tig00000711.67


Description : Protein PAM71-homolog, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000711.67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00041910 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.PAM71... 0.01 OrthoFinder output from all 47 species
Adi_g049937 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Aob_g01813 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Aop_g30835 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0226.g058999 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Dac_g45314 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g02423 No alias manganese/calcium cation transporter *(BICAT) & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01019449001 No alias Solute transport.carrier-mediated transport.PAM71... 0.03 OrthoFinder output from all 47 species
GSVIVT01029035001 No alias Solute transport.carrier-mediated transport.PAM71... 0.03 OrthoFinder output from all 47 species
LOC_Os01g12220.1 LOC_Os01g12220 manganese/calcium cation transporter (BICAT) 0.01 OrthoFinder output from all 47 species
MA_10427482g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g17540.1 No alias manganese/calcium cation transporter (BICAT) 0.01 OrthoFinder output from all 47 species
Msp_g11243 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017813 No alias manganese/calcium cation transporter *(BICAT) & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019614 No alias manganese/calcium cation transporter *(BICAT) & original... 0.01 OrthoFinder output from all 47 species
Solyc08g081770.3.1 Solyc08g081770 manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species
Spa_g09226 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Tin_g04357 No alias manganese/calcium cation transporter *(BICAT) & original... 0.01 OrthoFinder output from all 47 species
Zm00001e026075_P001 Zm00001e026075 manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001727 Gdt1 269 342
No external refs found!