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  5. Cpa|evm.model.tig00000741.29

Cpa|evm.model.tig00000741.29 (DCL1, CAF, EMB76,...)


Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1

Description : Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000741.29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00015000 DCL1, CAF,... RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease 0.01 OrthoFinder output from all 47 species
AMTR_s00026p00051870 DCL4, ATDCL4,... RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator... 0.01 OrthoFinder output from all 47 species
AT5G45150 RTL3 RNAse THREE-like protein 3 0.01 OrthoFinder output from all 47 species
Dac_g43749 DCL1, CAF,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_478114g0010 DCL1, CAF,... Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
Ore_g19703 DCL4, ATDCL4 endoribonuclease (DCL4) of transacting siRNA pathway &... 0.01 OrthoFinder output from all 47 species
Sam_g20078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo86110 DCL1, CAF,... RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 237 332
No external refs found!