Cpa|evm.model.tig00000754.29 (ATRABG3C, ATRAB7D, RABG3c)

Aliases : ATRABG3C, ATRAB7D, RABG3c

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.G-class RAB GTPase

Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000754.29

Target	Alias	Description	ECC score	Gene Family Method
Adi_g021268	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene23103.t1	ATRABG3C,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cre06.g311900	ATRAB7, RABG3E, ATRABG3E	Vesicle trafficking.regulation of membrane tethering and...	0.04	OrthoFinder output from all 47 species
Dcu_g26801	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g47846	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Len_g11961	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Len_g54625	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 47 species
MA_10043564g0010	AtRABG3d, RABG3d	G-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Mp8g13820.1	AtRABG3d, RABG3d	G-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Pir_g40856	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g00597	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011168	ATRABG3C, ATRAB7D, RABG3c	G-class RAB GTPase & original description: CDS=38-799	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0287.g027148	ATRABG3C, ATRAB7D, RABG3c	G-class RAB GTPase & original description: CDS=209-802	0.03	OrthoFinder output from all 47 species
Sam_g13873	No alias	G-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g11564	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g12567	ATRABG3C, ATRAB7D, RABG3c	G-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g15145	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0030030	cell projection organization	IEP	HCCA
BP	GO:0030031	cell projection assembly	IEP	HCCA
CC	GO:0034464	BBSome	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044782	cilium organization	IEP	HCCA
BP	GO:0060271	cilium assembly	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
BP	GO:0120031	plasma membrane bounded cell projection assembly	IEP	HCCA
BP	GO:0120036	plasma membrane bounded cell projection organization	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	12	177

External Links

No external refs found!

Cpa|evm.model.tig00000754.29 (ATRABG3C, ATRAB7D, RABG3c)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation