Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS21 | mtRPS21 component
Gene families : OG0004103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004103_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000863.30 | |
| Cluster | HCCA: Cluster_73 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g01448 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Cre01.g017300 | No alias | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g01906 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g41032 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g09590.1 | GHS1, LOC_Os02g09590 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g15740 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g02717 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g18474 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Mp4g21580.1 | No alias | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g01870 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Smo444102 | No alias | Protein biosynthesis.organelle translation... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc02g068090.3.1 | GHS1, Solyc02g068090 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g18473 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e013920_P001 | GHS1, Zm00001e013920 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004820 | glycine-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006426 | glycyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001911 | Ribosomal_S21 | 32 | 83 |
| No external refs found! |
