1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000889.10

Cpa|evm.model.tig00000889.10 (GLN1.3, ATGSKB6, GLN1;3)


Aliases : GLN1.3, ATGSKB6, GLN1;3

Description : Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamine synthetase


Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000889.10
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Adi_g054440 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Als_g44837 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Aob_g09347 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene58083.t1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Cba_g08502 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Cba_g18994 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.21G070700.1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Cre02.g113200 GLN1.3, ATGSKB6, GLN1;3 Nutrient uptake.nitrogen assimilation.ammonium... 0.09 OrthoFinder output from all 47 species
Dac_g05038 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Dac_g12722 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Mp1g03980.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.02 OrthoFinder output from all 47 species
Mp8g01410.1 GLN1.3, ATGSKB6, GLN1;3 Glutamine synthetase, chloroplastic OS=Chlamydomonas... 0.02 OrthoFinder output from all 47 species
Msp_g09593 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Msp_g12421 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Ppi_g05089 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Solyc01g080280.3.1 GS2, ATGSL1,... plastidial glutamine synthetase (GLN2) 0.01 OrthoFinder output from all 47 species
Solyc04g014510.3.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.01 OrthoFinder output from all 47 species
Spa_g25518 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Spa_g50319 GS2, ATGSL1, GLN2 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Tin_g12121 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEA Interproscan
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008146 Gln_synth_cat_dom 140 321
No external refs found!