Aliases : NRPE9A, NRPB9A, NRPD9A
Description : RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 9
Gene families : OG0003486 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003486_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000970.25 | |
| Cluster | HCCA: Cluster_85 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g006973 | NRPE9A, NRPB9A, NRPD9A | component *(NRPE9) of RNA polymerase V complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g006974 | NRPE9A, NRPB9A, NRPD9A | component *(NRPE9) of RNA polymerase V complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18436 | NRPE9A, NRPB9A, NRPD9A | component *(NRPE9) of RNA polymerase V complex &... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g13055 | NRPE9A, NRPB9A, NRPD9A | component *(NRPE9) of RNA polymerase V complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_02047 | NRPE9B, NRPD9B, NRPB9B | subunit 9 of RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g01230.1 | NRPE9A, NRPB9A,... | subunit 9 of RNA polymerase | 0.02 | OrthoFinder output from all 47 species | |
| MA_10427302g0010 | NRPE9A, NRPB9A, NRPD9A | subunit 9 of RNA polymerase | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g16330.1 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g45489 | NRPE9A, NRPB9A, NRPD9A | component *(NRPE9) of RNA polymerase V complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39814 | No alias | component *(NRPE9) of RNA polymerase V complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g27665 | NRPE9B, NRPD9B, NRPB9B | component *(NRPE9) of RNA polymerase V complex &... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e035550_P004 | NRPE9A, NRPB9A,... | subunit 9 of RNA polymerase | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005319 | lipid transporter activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| MF | GO:0005548 | phospholipid transporter activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006869 | lipid transport | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0015748 | organophosphate ester transport | IEP | HCCA |
| BP | GO:0015914 | phospholipid transport | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0030030 | cell projection organization | IEP | HCCA |
| BP | GO:0030031 | cell projection assembly | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0034464 | BBSome | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044782 | cilium organization | IEP | HCCA |
| BP | GO:0045454 | cell redox homeostasis | IEP | HCCA |
| BP | GO:0060271 | cilium assembly | IEP | HCCA |
| BP | GO:0070925 | organelle assembly | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:0120031 | plasma membrane bounded cell projection assembly | IEP | HCCA |
| BP | GO:0120036 | plasma membrane bounded cell projection organization | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| No external refs found! |
