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  5. Cpa|evm.model.tig00001038.12

Cpa|evm.model.tig00001038.12 (ORF158)


Aliases : ORF158

Description : Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001038.12
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene09287.t1 Aspi01Gene09287 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000158.96 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000158.98 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000405.12 No alias No description available 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000473.16 No alias RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000607.5 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000658.17 ORF158 No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000658.18 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.14 No alias No description available 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001066.2 No alias No description available 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001182.4 No alias RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.211 ORF158 No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020734.53 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.8 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020934.18 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.119 ORF158 No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021254.52 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021366.5 No alias No description available 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021518.13 ORF158 No description available 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021571.43 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.04 OrthoFinder output from all 47 species
Cre11.g467733 No alias RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 1171 1278
IPR000477 RT_dom 310 469
No external refs found!