Aliases : VPS4, SKD1, ATSKD1
Description : Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 OS=Arabidopsis thaliana
Gene families : OG0002846 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002846_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00001126.11 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0001.g000398 | VPS4, SKD1, ATSKD1 | EC_3.6 hydrolase acting on acid anhydride & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cre02.g079300 | VPS4, SKD1, ATSKD1 | Vesicle trafficking.endomembrane trafficking.ESCRT... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g03336 | VPS4, SKD1, ATSKD1 | EC_3.6 hydrolase acting on acid anhydride & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14391 | VPS4, SKD1, ATSKD1 | EC_3.6 hydrolase acting on acid anhydride & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13757 | VPS4, SKD1, ATSKD1 | EC_3.6 hydrolase acting on acid anhydride & original... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g04814.1 | VPS4, SKD1,... | ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g11706 | VPS4, SKD1, ATSKD1 | EC_3.6 hydrolase acting on acid anhydride & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g01619 | VPS4, SKD1, ATSKD1 | EC_3.6 hydrolase acting on acid anhydride & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02084 | VPS4, SKD1, ATSKD1 | EC_3.6 hydrolase acting on acid anhydride & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g38291 | VPS4, SKD1, ATSKD1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0110.g020624 | VPS4, SKD1, ATSKD1 | EC_3.6 hydrolase acting on acid anhydride & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37514 | No alias | EC_3.6 hydrolase acting on acid anhydride & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g04533 | VPS4, SKD1, ATSKD1 | EC_3.6 hydrolase acTing on acid anhydride & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025779_P001 | VPS4, SKD1,... | ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000813 | ESCRT I complex | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016197 | endosomal transport | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| CC | GO:0036452 | ESCRT complex | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1990380 | K48-linked deubiquitinase activity | IEP | HCCA |
| No external refs found! |
