No description available
Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00001264.1 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00006p00268510 | ATCNGC17,... | Cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| AT3G17700 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-binding transporter 1 | 0.01 | OrthoFinder output from all 47 species | |
| AT3G48010 | ATCNGC16, CNGC16 | cyclic nucleotide-gated channel 16 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G01010 | ATCNGC13, CNGC13 | cyclic nucleotide-gated channel 13 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G14870 | CNGC18, ATCNGC18 | cyclic nucleotide-gated channel 18 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g123270 | CNGC5, ATCNGC5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g08257 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g34084 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g14388 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g54760.1 | ATCNGC17,... | cyclic nucleotide-gated cation channel (CNGC) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g08850.1 | ATCNGC17,... | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g10580.1 | ATCNGC20,... | cyclic nucleotide-gated cation channel (CNGC) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os06g33570.1 | ATCNGC1, CNGC1,... | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g21733 | CNGC5, ATCNGC5 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.01 | OrthoFinder output from all 47 species | |
| MA_10425832g0010 | CNGC7, ATCNGC7 | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g26614 | DND1, ATCNGC2, CNGC2 | temperature sensor protein *(CNGC2) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g04360 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19477 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02834 | ATCNGC14, CNGC14 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g09687 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g30209 | No alias | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo113786 | ATCNGC9, CNGC9 | Solute transport.channels.VIC superfamily.cyclic... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g051920.4.1 | ATCNGC1, CNGC1,... | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g00978 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g01163 | CNGC7, ATCNGC7 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02085 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016088_P002 | ATCNGC17,... | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | HCCA |
| MF | GO:0005253 | monoatomic anion channel activity | IEP | HCCA |
| MF | GO:0005254 | chloride channel activity | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
| BP | GO:0006821 | chloride transport | IEP | HCCA |
| MF | GO:0008308 | voltage-gated monoatomic anion channel activity | IEP | HCCA |
| MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022832 | voltage-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
