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  5. Cpa|evm.model.tig00001532.8

Cpa|evm.model.tig00001532.8 (TAF11b)


Aliases : TAF11b

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF11 component


Gene families : OG0006002 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001532.8
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0256.g060524 TAF11 component *(TAF11) of TFIId basal transcription... 0.02 OrthoFinder output from all 47 species
Sam_g25011 No alias component *(TAF11) of TFIId basal transcription... 0.02 OrthoFinder output from all 47 species
Spa_g08216 TAF11 component *(TAF11) of TFIId basal transcription... 0.01 OrthoFinder output from all 47 species
Zm00001e028075_P001 TAF11, Zm00001e028075 component TAF11 of TFIId basal transcription regulation complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR006809 TAFII28_dom 113 170
No external refs found!