Cpa|evm.model.tig00020554.32

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF1A PIC assembly factor

Gene families : OG0002330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002330_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020554.32

Target	Alias	Description	ECC score	Gene Family Method
Aob_g08163	No alias	assembly factor (eIF1A) of eIF1 & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g08758	No alias	assembly factor (eIF1A) of eIF1 & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g42374	No alias	assembly factor (eIF1A) of eIF1 & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g06543	No alias	assembly factor (eIF1A) of eIF1 & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g03764	No alias	assembly factor (eIF1A) of eIF1 & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g09895	No alias	assembly factor (eIF1A) of eIF1 & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006196	RNA-binding_domain_S1_IF1	31	92

External Links

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