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  5. Cpa|evm.model.tig00020610.80

Cpa|evm.model.tig00020610.80


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL37 component


Gene families : OG0002755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002755_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020610.80

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00029660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
AT1G52300 No alias Zinc-binding ribosomal protein family protein 0.13 OrthoFinder output from all 47 species
AT3G16080 No alias Zinc-binding ribosomal protein family protein 0.14 OrthoFinder output from all 47 species
Ala_g31967 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Als_g01368 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aob_g02563 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g18943 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Aop_g22710 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g28619 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Aop_g67698 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Aspi01Gene09915.t1 Aspi01Gene09915 component *(eL37) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35665.t1 Aspi01Gene35665 component *(eL37) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0375.g067257 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g68198 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.13G060700.1 Ceric.13G060700 component *(eL37) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Cre10.g430400 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 OrthoFinder output from all 47 species
Dac_g40440 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dac_g42769 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01017081001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 OrthoFinder output from all 47 species
GSVIVT01035677001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder output from all 47 species
Gb_29003 No alias component RPL37 of LSU proteome component 0.1 OrthoFinder output from all 47 species
Gb_33514 No alias component RPL37 of LSU proteome component 0.08 OrthoFinder output from all 47 species
LOC_Os02g56990.1 LOC_Os02g56990 component RPL37 of LSU proteome component 0.08 OrthoFinder output from all 47 species
LOC_Os08g03450.1 LOC_Os08g03450 component RPL37 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Lfl_g19349 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
MA_741492g0010 No alias component RPL37 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp2g12400.1 No alias component RPL37 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pir_g13150 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c18_13160V3.1 Pp3c18_13160 Zinc-binding ribosomal protein family protein 0.11 OrthoFinder output from all 47 species
Pp3c20_2550V3.1 Pp3c20_2550 Zinc-binding ribosomal protein family protein 0.08 OrthoFinder output from all 47 species
Pp3c21_9910V3.1 Pp3c21_9910 Zinc-binding ribosomal protein family protein 0.04 OrthoFinder output from all 47 species
Pp3c23_17260V3.1 Pp3c23_17260 Zinc-binding ribosomal protein family protein 0.09 OrthoFinder output from all 47 species
Pp3c9_8500V3.1 Pp3c9_8500 Zinc-binding ribosomal protein family protein 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020090 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Solyc03g120780.3.1 Solyc03g120780 component RPL37 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Solyc06g066660.4.1 Solyc06g066660 component RPL37 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Spa_g37746 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Tin_g37275 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e001908_P001 Zm00001e001908 component RPL37 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Zm00001e013434_P001 Zm00001e013434 component RPL37 of LSU proteome component 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001514 selenocysteine incorporation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006451 translational readthrough IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001569 Ribosomal_L37e 2 53
No external refs found!