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  5. Cpa|evm.model.tig00020704.55

Cpa|evm.model.tig00020704.55


Description : 50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea


Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020704.55

Target Alias Description ECC score Gene Family Method Actions
AT1G70190 No alias Ribosomal protein L7/L12, oligomerisation;Ribosomal... 0.02 OrthoFinder output from all 47 species
AT3G06040 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 OrthoFinder output from all 47 species
AT4G36420 No alias Ribosomal protein L12 family protein 0.03 OrthoFinder output from all 47 species
Ceric.19G029000.1 Ceric.19G029000 not classified & original description: pacid=50576272... 0.01 OrthoFinder output from all 47 species
Ceric.29G035500.1 Ceric.29G035500 not classified & original description: pacid=50624913... 0.02 OrthoFinder output from all 47 species
Cre06.g293700 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dcu_g02341 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_26365 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Gb_27679 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species
Msp_g08940 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g03385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11119 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006788 heme oxidation IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 98 164
No external refs found!