Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana
Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00020912.27 | |
| Cluster | HCCA: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00083440 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g088264 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g100512 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g02027 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g64152 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g01661 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g04644 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Gb_33485 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os11g41890.1 | LOC_Os11g41890 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g11046 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g25069 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0132.g022149 | No alias | not classified & original description: CDS=278-1477 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37589 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011415_P001 | Zm00001e011415 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e035389_P001 | Zm00001e035389 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003941 | L-serine ammonia-lyase activity | IEP | HCCA |
| MF | GO:0004089 | carbonate dehydratase activity | IEP | HCCA |
| MF | GO:0004486 | methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity | IEP | HCCA |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | HCCA |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
| BP | GO:0006094 | gluconeogenesis | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0006817 | phosphate ion transport | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | HCCA |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
| MF | GO:0016841 | ammonia-lyase activity | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| BP | GO:0019319 | hexose biosynthetic process | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0045454 | cell redox homeostasis | IEP | HCCA |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| No external refs found! |
