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  5. Cpa|evm.model.tig00020952.7

Cpa|evm.model.tig00020952.7 (PGP2)


Aliases : PGP2

Description : ABC transporter B family member 2 OS=Arabidopsis thaliana


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020952.7

Target Alias Description ECC score Gene Family Method Actions
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.02 OrthoFinder output from all 47 species
Als_g51333 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene12320.t1 PGP2, Aspi01Gene12320 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42794.t3 PGP3, MDR3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene62054.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g35769 PGP11 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g08511 PGP11 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g08514 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g19409 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g02960 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Gb_32127 PGP11 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Lfl_g08040 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g27273 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40244 PGP11 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_6958g0010 PGP21 ABC transporter B family member 21 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g13353 PGP13 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g33236 ABCB19,... ABC-B-type transporter *(AMN3) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g26459 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g57081 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05161 PGP20 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g27139 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo123936 ATPGP4, PGP4, ABCB4, MDR4 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Smo176522 ATPGP4, PGP4, ABCB4, MDR4 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Smo92485 ABCB19,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Solyc05g013890.3.1 Solyc05g013890 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Spa_g00479 PGP20 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 321 395
No external refs found!