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  5. Cpa|evm.model.tig00020961.97

Cpa|evm.model.tig00020961.97 (AtRABA1e, RABA1e)


Aliases : AtRABA1e, RABA1e

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020961.97
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00103890 AtRABA6b,... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
AMTR_s00108p00135260 AtRABA1f,... Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
AMTR_s00148p00100780 AtRABA5a,... Ras-related protein RABA5a OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00165p00060220 RAB-A2C,... Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
AT1G07410 RABA2b,... RAB GTPase homolog A2B 0.02 OrthoFinder output from all 47 species
AT1G09630 ATRABA2A,... RAB GTPase 11C 0.02 OrthoFinder output from all 47 species
AT1G28550 RABA1i, AtRABA1i RAB GTPase homolog A1I 0.03 OrthoFinder output from all 47 species
AT2G33870 ArRABA1h RAB GTPase homolog A1H 0.03 OrthoFinder output from all 47 species
Adi_g001047 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015797 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078039 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g31350 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15785 ARA-1, ATRABA5E,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30591 RABA2b,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08482 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10560 ATRABA2A,... A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene03989.t1 AtRABA1f,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29497.t1 AtRABA1f,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60173.t1 AtRABA1f,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66568.t1 AtRABA1f,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g008909 ATRABA5C, ARA4,... A-class RAB GTPase & original description: CDS=226-924 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010022 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=217-867 0.02 OrthoFinder output from all 47 species
Azfi_s0158.g053866 ATRABA2A,... A-class RAB GTPase & original description: CDS=282-950 0.02 OrthoFinder output from all 47 species
Cba_g09596 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26391 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75310 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G022800.1 AtRABA1f,... A-class RAB GTPase & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.1Z244400.1 AtRABA1e,... not classified & original description: pacid=50613691... 0.02 OrthoFinder output from all 47 species
Cre03.g189250 ATRABA2A,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Dac_g02569 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04872 AtRABA5a, RABA5a not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g05558 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15893 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10466 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46462 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00471 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02057 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g10712 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01021253001 ATHSGBP, RABA1d,... Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
Gb_30583 ATHSGBP, RABA1d,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Gb_34717 ARA-1, ATRABA5E,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Gb_37703 ATRABA2A,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os03g62600.1 ATRABA2A,... A-class RAB GTPase 0.01 OrthoFinder output from all 47 species
LOC_Os05g01480.1 ATRABA2A,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os05g44070.1 ATRABA1B, RAB11,... A-class RAB GTPase 0.01 OrthoFinder output from all 47 species
LOC_Os07g44040.1 AtRABA5a,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Len_g03672 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05986 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
MA_10434967g0010 AtRABA1f, RABA1f A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
MA_113056g0010 AtRABA5a, RABA5a A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
MA_18685g0010 AtRABA5d, RABA5d A-class RAB GTPase 0.01 OrthoFinder output from all 47 species
Mp3g00730.1 ATRABA5C, ARA4,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Msp_g02354 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g04633 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39855 ARA-1, ATRABA5E,... A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g15033 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g16173 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g20309 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08711 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40897 No alias A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Smo230012 AtRABA5d, RABA5d Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
Solyc03g006270.3.1 AtRABA1f,... A-class RAB GTPase 0.01 OrthoFinder output from all 47 species
Solyc05g052900.3.1 RABA2b,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Spa_g07580 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12437 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g42041 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g05879 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13810 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e030680_P001 ATHSGBP, RABA1d,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Zm00001e033825_P001 AtRABA1f,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e035644_P001 AtRABA5a,... A-class RAB GTPase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 172
No external refs found!