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  5. Cpa|evm.model.tig00021123.16

Cpa|evm.model.tig00021123.16


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021123.16

Target Alias Description ECC score Gene Family Method Actions
AT5G04760 No alias Duplicated homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g21200 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene00651.t1 Aspi01Gene00651 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Cba_g13543 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.01 OrthoFinder output from all 47 species
Cre10.g430750 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Dde_g10905 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.01 OrthoFinder output from all 47 species
MA_17466g0010 No alias transcription factor (MYB-related) 0.01 OrthoFinder output from all 47 species
Ore_g09018 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.01 OrthoFinder output from all 47 species
Ore_g15657 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Pir_g09334 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011276 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e037865_P001 Zm00001e037865 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 235 281
No external refs found!