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  5. Cpa|evm.model.tig00021127.140

Cpa|evm.model.tig00021127.140


Description : Translation factor GUF1 homolog, mitochondrial OS=Sorghum bicolor


Gene families : OG0002290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002290_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021127.140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00109510 evm_27.TU.AmTr_v1... Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
AT5G08650 No alias Small GTP-binding protein 0.02 OrthoFinder output from all 47 species
Ala_g02382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02197 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene10814.t1 Aspi01Gene10814 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0072.g036902 No alias not classified & original description: CDS=1-1971 0.02 OrthoFinder output from all 47 species
Cre03.g165000 No alias Translation factor GUF1 homolog, chloroplastic... 0.04 OrthoFinder output from all 47 species
Ehy_g10737 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01022409001 No alias Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Gb_09677 No alias Translation factor GUF1 homolog, mitochondrial... 0.02 OrthoFinder output from all 47 species
LOC_Os06g05250.2 LOC_Os06g05250 Translation factor GUF1 homolog, mitochondrial OS=Oryza... 0.02 OrthoFinder output from all 47 species
Len_g04338 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g09463 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g43097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo230251 No alias Translation factor GUF1 homolog, mitochondrial... 0.02 OrthoFinder output from all 47 species
Solyc04g015450.3.1 Solyc04g015450 Translation factor GUF1 homolog, chloroplastic... 0.02 OrthoFinder output from all 47 species
Zm00001e025200_P002 Zm00001e025200 Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000640 EFG_V-like 449 532
IPR000795 T_Tr_GTP-bd_dom 67 244
IPR013842 LepA_CTD 537 645
No external refs found!