Cpa|evm.model.tig00021127.70 (ALS1, ATTAP2, TAP2)

Aliases : ALS1, ATTAP2, TAP2

Description : ABC transporter B family member 25 OS=Oryza sativa subsp. japonica

Gene families : OG0001464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021127.70

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00228170	ALS1, ATTAP2,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
AT1G70610	ATTAP1, TAP1	transporter associated with antigen processing protein 1	0.01	OrthoFinder output from all 47 species
Aob_g01984	ALS1, ATTAP2, TAP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01032404001	ATTAP1, TAP1	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Nbi_g02213	ALS1, ATTAP2, TAP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Solyc03g114950.2.1	ALS1, ATTAP2,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Tin_g02061	ALS1, ATTAP2, TAP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e012019_P002	ALS1, ATTAP2,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	HCCA
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	IEP	HCCA
MF	GO:0004114	3',5'-cyclic-nucleotide phosphodiesterase activity	IEP	HCCA
MF	GO:0004673	protein histidine kinase activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0140299	small molecule sensor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	565	652
IPR011527	ABC1_TM_dom	165	437

External Links

No external refs found!