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  5. Cpa|evm.model.tig00021275.7

Cpa|evm.model.tig00021275.7


Description : Vesicle trafficking.autophagosome formation.cargo recruitment.NBR1 autophagic adapter protein


Gene families : OG0000431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021275.7
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT4G24690 No alias ubiquitin-associated (UBA)/TS-N domain-containing... 0.01 OrthoFinder output from all 47 species
Als_g13865 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Als_g25942 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11786.t1 Aspi01Gene11786 autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Cba_g16980 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.01 OrthoFinder output from all 47 species
Ceric.26G041200.1 Ceric.26G041200 autophagosome cargo receptor protein *(NBR1) & original... 0.01 OrthoFinder output from all 47 species
Dac_g07074 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Dac_g13529 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Dac_g13530 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Dac_g23479 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
MA_10436174g0010 No alias NBR1 autophagosome autophagic adapter protein 0.02 OrthoFinder output from all 47 species
Ore_g02792 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g14144 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g37619 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g112230.4.1 Solyc03g112230 NBR1 autophagosome autophagic adapter protein 0.02 OrthoFinder output from all 47 species
Tin_g11535 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 23 88
IPR000433 Znf_ZZ 218 260
No external refs found!