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  5. Cpa|evm.model.tig00021312.11

Cpa|evm.model.tig00021312.11 (CYCB2;2)


Aliases : CYCB2;2

Description : G2/mitotic-specific cyclin S13-6 OS=Glycine max


Gene families : OG0000745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021312.11
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00131830 CYCB1;1, CYCB1,... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.02 OrthoFinder output from all 47 species
AT1G16330 CYCB3;1 cyclin b3;1 0.01 OrthoFinder output from all 47 species
AT1G20610 CYCB2;3 Cyclin B2;3 0.02 OrthoFinder output from all 47 species
AT1G34460 CYC3, CYCB1;5 CYCLIN B1;5 0.01 OrthoFinder output from all 47 species
AT1G76310 CYCB2;4 CYCLIN B2;4 0.03 OrthoFinder output from all 47 species
AT4G35620 CYCB2;2 Cyclin B2;2 0.02 OrthoFinder output from all 47 species
AT5G06150 CYCB1;2, CYC1BAT Cyclin family protein 0.03 OrthoFinder output from all 47 species
Ala_g23920 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Als_g15872 CYCB1;2, CYC1BAT not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16595 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Als_g29465 CYCB1;2, CYC1BAT regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g52020 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Als_g58773 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene11290.t1 CYCB2;3, Aspi01Gene11290 regulatory protein *(CYCB) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0113.g045905 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0230.g059168 CYCB2;4 not classified & original description: CDS=1-1479 0.03 OrthoFinder output from all 47 species
Ceric.06G046300.1 CYCB2;3, Ceric.06G046300 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.18G071600.1 CYCB2;3, Ceric.18G071600 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.21G047800.1 CYCB2;3, Ceric.21G047800 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Ceric.24G055000.1 CYCB2;3, Ceric.24G055000 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G002300.1 CYCB2;3, Ceric.26G002300 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.31G034200.1 CYCB2;3, Ceric.31G034200 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Dac_g17049 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dcu_g01163 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dcu_g03733 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Dcu_g08761 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01025781001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.02 OrthoFinder output from all 47 species
GSVIVT01032782001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.01 OrthoFinder output from all 47 species
Gb_01761 CYCB3;1 cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
Gb_03506 CYCB1;4 cyclin (CYCB) 0.01 OrthoFinder output from all 47 species
Gb_10664 CYCB2;3 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Gb_27795 CYCB1;2, CYC1BAT G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.02 OrthoFinder output from all 47 species
LOC_Os01g59120.1 CYCB1;2,... cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41390.1 CYCB1;2,... cyclin (CYCB) 0.01 OrthoFinder output from all 47 species
LOC_Os06g51110.2 CYCB2;3, LOC_Os06g51110 cyclin (CYCB) 0.01 OrthoFinder output from all 47 species
Len_g05365 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Len_g11919 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Len_g56071 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Lfl_g25214 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Lfl_g25818 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
MA_10314137g0010 CYCB2;2 Cyclin-B1-5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_10433093g0020 CYCB2;3 Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
MA_127335g0010 CYCB2;3 cyclin (CYCB) 0.05 OrthoFinder output from all 47 species
MA_311439g0010 CYCB1;3, CYC2 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Mp5g10030.1 CYCB2;2 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Msp_g07854 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Msp_g21114 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Msp_g42899 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Nbi_g03000 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04270 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ore_g40815 CYCB2;2 regulatory protein *(CYCB) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Ppi_g12194 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Ppi_g31931 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025884 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Sam_g16342 No alias regulatory protein *(CYCB) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Smo230742 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.01 OrthoFinder output from all 47 species
Solyc01g009040.4.1 CYCB1;2,... cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Solyc02g082820.3.1 CYCB2;3, Solyc02g082820 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Solyc03g032190.3.1 CYCB2;3, Solyc03g032190 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Solyc07g066660.4.1 CYCB3;1, Solyc07g066660 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Solyc10g078330.2.1 CYCB1;1, CYCB1,... cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Solyc10g080950.2.1 CYCB1;2,... cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Spa_g04211 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g23146 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g43416 CYCA3;1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g50231 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g53648 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Tin_g05068 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Tin_g12417 CYCB2;4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007244_P001 CYCB2;3, Zm00001e007244 cyclin (CYCB) 0.01 OrthoFinder output from all 47 species
Zm00001e028899_P002 CYCB1;2,... cyclin (CYCB) 0.01 OrthoFinder output from all 47 species
Zm00001e030146_P001 CYCB2;3, Zm00001e030146 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Zm00001e041485_P001 CYCB2;3, Zm00001e041485 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0001882 nucleoside binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006231 dTMP biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009157 deoxyribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009162 deoxyribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009176 pyrimidine deoxyribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009177 pyrimidine deoxyribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009219 pyrimidine deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019692 deoxyribose phosphate metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042083 5,10-methylenetetrahydrofolate-dependent methyltransferase activity IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046073 dTMP metabolic process IEP HCCA
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0050797 thymidylate synthase (FAD) activity IEP HCCA
BP GO:0051095 regulation of helicase activity IEP HCCA
BP GO:0051097 negative regulation of helicase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1905462 regulation of DNA duplex unwinding IEP HCCA
BP GO:1905463 negative regulation of DNA duplex unwinding IEP HCCA
BP GO:1905774 regulation of DNA helicase activity IEP HCCA
BP GO:1905775 negative regulation of DNA helicase activity IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 211 337
IPR004367 Cyclin_C-dom 339 453
No external refs found!