1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00021318.73

Cpa|evm.model.tig00021318.73 (UBQ10)


Aliases : UBQ10

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ ubiquitin-fold protein


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021318.73
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT2G35635 UBQ7, RUB2 ubiquitin 7 0.01 OrthoFinder output from all 47 species
Ala_g18687 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27780 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49627 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Als_g58040 UBQ11 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g11689 UBQ4 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g08297 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g32072 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g63712 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g45001 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g48343 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g25908 UBQ5 component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Gb_02030 UBQ10 ubiquitin-fold protein (UBQ) 0.01 OrthoFinder output from all 47 species
Gb_35273 UBQ10 ubiquitin-fold protein (UBQ) 0.01 OrthoFinder output from all 47 species
LOC_Os02g06640.1 UBQ10, LOC_Os02g06640 ubiquitin-fold protein (UBQ) 0.01 OrthoFinder output from all 47 species
LOC_Os06g46770.2 UBQ10, LOC_Os06g46770 ubiquitin-fold protein (UBQ) 0.01 OrthoFinder output from all 47 species
MA_382859g0010 UBQ11 Polyubiquitin (Fragment) OS=Hordeum vulgare... 0.01 OrthoFinder output from all 47 species
MA_455989g0010 RUB1, ATRUB1, NEDD8 ubiquitin-fold protein (RUB) 0.02 OrthoFinder output from all 47 species
MA_89348g0010 UBQ14 ubiquitin-fold protein (UBQ) 0.01 OrthoFinder output from all 47 species
MA_9420337g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.01 OrthoFinder output from all 47 species
Nbi_g41750 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g10452 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Ppi_g47816 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Ppi_g50366 UBQ6 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g05951 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g25855 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo228943 UBQ4 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Spa_g33680 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g38246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g40776 UBQ14 UBQ ubiquiTin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e010317_P001 Zm00001e010317 component RPL40 of LSU proteome component 0.01 OrthoFinder output from all 47 species
Zm00001e034164_P001 RUB1, ATRUB1,... ubiquitin-fold protein (RUB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008452 RNA ligase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 243 310
IPR000626 Ubiquitin-like_dom 531 602
IPR000626 Ubiquitin-like_dom 459 526
IPR000626 Ubiquitin-like_dom 3 85
IPR000626 Ubiquitin-like_dom 387 454
IPR000626 Ubiquitin-like_dom 90 162
IPR000626 Ubiquitin-like_dom 167 238
IPR000626 Ubiquitin-like_dom 315 382
No external refs found!