Description : RNA processing.RNA 3-end polyadenylation.Cleavage Factor I (CF-Im) complex.CPFS5/CFIm25 component
Gene families : OG0003646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003646_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dde_g41999 | No alias | component *(CPFS5/CFIm25) of Cleavage Factor I (CF-Im)... | 0.01 | OrthoFinder output from all 47 species | |
| Mp8g17730.1 | No alias | component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex | 0.01 | OrthoFinder output from all 47 species | |
| Mp8g18010.1 | No alias | component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g28673 | No alias | component *(CPFS5/CFIm25) of Cleavage Factor I (CF-Im)... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g01727 | No alias | component *(CPFS5/CFIm25) of Cleavage Factor I (CF-Im)... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006497_P001 | Zm00001e006497 | component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041963_P001 | Zm00001e041963 | component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003729 | mRNA binding | IEA | Interproscan |
| CC | GO:0005849 | mRNA cleavage factor complex | IEA | Interproscan |
| BP | GO:0006378 | mRNA polyadenylation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| CC | GO:0030008 | TRAPP complex | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030126 | COPI vesicle coat | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016706 | Cleav_polyA_spec_factor_su5 | 49 | 236 |
| No external refs found! |
