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  5. Cpa|evm.model.tig00021428.2

Cpa|evm.model.tig00021428.2 (ATTRX1, ATTRX H1, TRX1)


Aliases : ATTRX1, ATTRX H1, TRX1

Description : Redox homeostasis.cytosol/mitochondrion/nucleus redox homeostasis.H-type thioredoxin


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021428.2

Target Alias Description ECC score Gene Family Method Actions
AT5G42980 ATTRX3, ATTRXH3,... thioredoxin 3 0.02 OrthoFinder output from all 47 species
Adi_g039269 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20534 TRXH2, TRX2,... O-type thioredoxin *(Trx-O) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g36349 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g40869 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g41805 TH7, ATH7 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44773 ATHM4, TRX-M4, ATM4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g45247 ATHIP2, TDX, HIP, ATTDX not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23140 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29931 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g55811 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g61335 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g55894 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_20967 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin. protein-S-nitrosothiol reductase (TRX5) 0.03 OrthoFinder output from all 47 species
LOC_Os04g53740.1 ATCXXS1, CXXS1,... H-type thioredoxin 0.02 OrthoFinder output from all 47 species
Len_g26679 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g03986 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08005 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g47179 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 23 93
No external refs found!