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  5. Cpa|evm.model.tig00021612.50

Cpa|evm.model.tig00021612.50


Description : Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component


Gene families : OG0006357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006357_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021612.50

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene60162.t1 Aspi01Gene60162 component *(APC4) of (APC/C)-dependent ubiquitination... 0.01 OrthoFinder output from all 47 species
Aspi01Gene60164.t1 Aspi01Gene60164 component *(APC4) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Ceric.02G071700.1 Ceric.02G071700 component *(APC4) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Gb_32209 No alias component APC4 of (APC/C)-dependent ubiquitination... 0.01 OrthoFinder output from all 47 species
Pir_g20389 No alias component *(APC4) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 23 109
IPR024790 APC4_long_dom 274 436
No external refs found!