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  5. Cpa|evm.model.tig00022075.15

Cpa|evm.model.tig00022075.15


Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3l component


Gene families : OG0004705 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00022075.15
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT5G25757 No alias RNA polymerase I-associated factor PAF67 0.01 OrthoFinder output from all 47 species
Aev_g06648 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Aop_g00719 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.01 OrthoFinder output from all 47 species
Azfi_s0033.g024996 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g03952 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Ceric.03G028800.1 Ceric.03G028800 component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cre17.g697450 No alias Protein biosynthesis.translation... 0.08 OrthoFinder output from all 47 species
Dcu_g05568 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01035660001 No alias Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
LOC_Os05g13950.1 LOC_Os05g13950 component eIF3l of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
MA_4833g0010 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.01 OrthoFinder output from all 47 species
MA_4833g0020 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.01 OrthoFinder output from all 47 species
MA_525836g0010 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Mp3g02920.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.05 OrthoFinder output from all 47 species
Sam_g26742 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Smo146079 No alias Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Solyc08g068340.3.1 Solyc08g068340 component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species
Spa_g01339 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Tin_g07453 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e016402_P001 Zm00001e016402 component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species
Zm00001e026109_P001 Zm00001e026109 component eIF3l of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR019382 eIF3l 123 398
No external refs found!