Aliases : RPT2
Description : Root phototropism protein 2 OS=Arabidopsis thaliana (sp|q682s0|rpt2_arath : 350.0)
Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_00052 | |
| Cluster | HCCA: Cluster_160 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G49970 | No alias | Phototropic-responsive NPH3 family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G67385 | No alias | Phototropic-responsive NPH3 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Als_g39222 | No alias | substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g08261 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01628 | No alias | substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01024541001 | RPT2 | Root phototropism protein 2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g22600.1 | LOC_Os03g22600 | BTB/POZ domain-containing protein At1g03010... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g02540.1 | LOC_Os12g02540 | BTB/POZ domain-containing protein At3g08570... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g58450 | No alias | substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... | 0.07 | OrthoFinder output from all 47 species | |
| MA_842546g0010 | No alias | BTB/POZ domain-containing protein At5g48800... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g12476 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo231529 | No alias | BTB/POZ domain-containing protein At5g48800... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g074630.3.1 | Solyc09g074630 | BTB/POZ domain-containing protein At1g03010... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09159 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027356 | NPH3_dom | 75 | 322 |
| No external refs found! |
