Gb_00179 (RPN5B)


Aliases : RPN5B

Description : regulatory component RPN5 of 26S proteasome


Gene families : OG0003644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003644_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00179

Target Alias Description ECC score Gene Family Method Actions
AT5G09900 EMB2107, MSA, RPN5A 26S proteasome regulatory subunit, putative (RPN5) 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.57 RPN5B Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Cre14.g632775 RPN5B Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Mp6g06620.1 RPN5B regulatory component RPN5 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Solyc04g012040.3.1 RPN5B, Solyc04g012040 regulatory component RPN5 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e011647_P002 RPN5B, Zm00001e011647 regulatory component RPN5 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0106073 dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR040896 RPN5_C 317 349
IPR000717 PCI_dom 96 175
No external refs found!