Gb_00187

Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 114.0)

Gene families : OG0008529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008529_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_00187
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
Gb_02953	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.04	OrthoFinder output from all 47 species
Gb_08601	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.05	OrthoFinder output from all 47 species
Gb_10189	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.05	OrthoFinder output from all 47 species
Gb_11555	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.12	OrthoFinder output from all 47 species
Gb_12026	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.04	OrthoFinder output from all 47 species
Gb_12173	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.06	OrthoFinder output from all 47 species
Gb_14971	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.07	OrthoFinder output from all 47 species
Gb_16342	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.08	OrthoFinder output from all 47 species
Gb_18747	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.05	OrthoFinder output from all 47 species
Gb_19068	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.02	OrthoFinder output from all 47 species
Gb_22824	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.04	OrthoFinder output from all 47 species
Gb_29891	No alias	Uncharacterized mitochondrial protein AtMg00860...	0.05	OrthoFinder output from all 47 species
Gb_31466	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.05	OrthoFinder output from all 47 species
Gb_32835	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.03	OrthoFinder output from all 47 species
Gb_37051	ORF158	Uncharacterized mitochondrial protein AtMg00860...	0.03	OrthoFinder output from all 47 species
Gb_38708	No alias	Uncharacterized mitochondrial protein AtMg00860...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR041588	Integrase_H2C2	681	736
IPR041373	RT_RNaseH	495	594
IPR001584	Integrase_cat-core	759	864

External Links

No external refs found!

Gb_00187

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation