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  5. Gb_00466

Gb_00466 (ATHDA5, HDA05, HDA5)


Aliases : ATHDA5, HDA05, HDA5

Description : class-II histone deacetylase


Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00466

Target Alias Description ECC score Gene Family Method Actions
Ala_g14869 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007870001 ATHDA5, HDA05, HDA5 Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
LOC_Os07g06980.1 ATHDA15, HDA15,... class-II histone deacetylase 0.03 OrthoFinder output from all 47 species
Pir_g10819 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09864 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 36 336
No external refs found!