Gb_00558 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)

Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B

Description : transcription factor (HSF). transcriptional regulator (HsfA1)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_00558
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00209530	HSFA1E,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	OrthoFinder output from all 47 species
AT2G26150	HSFA2, ATHSFA2	heat shock transcription factor A2	0.03	OrthoFinder output from all 47 species
AT3G63350	HSFA7B, AT-HSFA7B	winged-helix DNA-binding transcription factor family protein	0.03	OrthoFinder output from all 47 species
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.05	OrthoFinder output from all 47 species
Aev_g32508	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g12580	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g18442	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g52565	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69372.t1	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g78307	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g16680	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g21083	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g04697	HSF4, HSFB1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g53340.2	AT-HSFA6B,...	transcription factor (HSF)	0.06	OrthoFinder output from all 47 species
LOC_Os06g36930.1	AT-HSFA7A,...	transcription factor (HSF)	0.06	OrthoFinder output from all 47 species
MA_11527g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Msp_g09006	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g19596	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g24815	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g43592	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g05585	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06198	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g48572	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g57654	HSFA2, ATHSFA2	HSF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g64053	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Solyc03g026020.3.1	AT-HSFB2A,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc04g016000.3.1	AT-HSFB3, HSFB3,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc08g080540.3.1	AT-HSFB2B,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Tin_g20093	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g38102	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004752_P001	AT-HSFA6B,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Zm00001e024268_P001	AT-HSFB2A,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e034336_P001	HSFB4, SCZ,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e037165_P002	AT-HSFA7A,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0051087	chaperone binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	14	103

External Links

No external refs found!

Gb_00558 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation