Description : component RPL35 of LSU proteome component
Gene families : OG0000495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000495_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_01009 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00034p00044200 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00040p00225520 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G39390 | No alias | Ribosomal L29 family protein | 0.09 | OrthoFinder output from all 47 species | |
| AT3G09500 | No alias | Ribosomal L29 family protein | 0.09 | OrthoFinder output from all 47 species | |
| AT5G02610 | No alias | Ribosomal L29 family protein | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g045235 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g129877 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g32223 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g18235 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g24513 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g17159 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19909 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23213 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Aop_g50897 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0437.g069964 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Azfi_s0449.g070720 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g74059 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g77930 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G004300.1 | Ceric.10G004300 | component *(uL29) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.39G045700.1 | Ceric.39G045700 | component *(uL29) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000241.79 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Cre14.g617900 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Dac_g01910 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Dac_g29193 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g26719 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g40454 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g44954 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g13562 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01005972001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.14 | OrthoFinder output from all 47 species | |
| GSVIVT01025050001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Len_g05873 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g20319 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g31826 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10429159g0020 | No alias | component RPL35 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
| Mp6g05620.1 | No alias | component RPL35 of LSU proteome component | 0.16 | OrthoFinder output from all 47 species | |
| Msp_g02937 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g28058 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g15763 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g16217 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06793 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c13_5200V3.1 | Pp3c13_5200 | Ribosomal L29 family protein | 0.08 | OrthoFinder output from all 47 species | |
| Pp3c3_2800V3.1 | Pp3c3_2800 | Ribosomal L29 family protein | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g33963 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g50264 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0053.g014105 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g05963 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g23308 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g23420 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g31234 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36756 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37983 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g46978 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Smo419858 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Smo438324 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Smo79331 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc04g010240.3.1 | Solyc04g010240 | component RPL35 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
| Solyc06g075620.3.1 | Solyc06g075620 | component RPL35 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g07344 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g34294 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g27506 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e008428_P002 | Zm00001e008428 | component RPL35 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e014607_P001 | Zm00001e014607 | component RPL35 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e040695_P003 | Zm00001e040695 | component RPL35 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| CC | GO:0048500 | signal recognition particle | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
