1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_01327

Gb_01327


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 647.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01327

Target Alias Description ECC score Gene Family Method Actions
Aev_g42356 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000244001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01003124001 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
GSVIVT01008757001 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
GSVIVT01019231001 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
GSVIVT01021246001 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
GSVIVT01022208001 No alias Pentatricopeptide repeat-containing protein At4g19191,... 0.04 OrthoFinder output from all 47 species
GSVIVT01023644001 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
GSVIVT01032394001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
GSVIVT01035618001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.05 OrthoFinder output from all 47 species
Gb_00259 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.09 OrthoFinder output from all 47 species
Gb_01174 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Gb_01366 CRR2 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Gb_03345 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_03572 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_03578 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
Gb_03693 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_04167 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_05554 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_08118 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
Gb_08834 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
Gb_11545 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_11664 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_12556 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.06 OrthoFinder output from all 47 species
Gb_14172 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_16448 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.06 OrthoFinder output from all 47 species
Gb_16898 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
Gb_19924 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_20572 CRR22 RNA editing factor (CRR21) 0.04 OrthoFinder output from all 47 species
Gb_20634 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
Gb_21714 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_23088 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
Gb_25130 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.07 OrthoFinder output from all 47 species
Gb_25328 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_26260 CRR22 RNA editing factor (MEF7) 0.05 OrthoFinder output from all 47 species
Gb_26571 OTP84 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_27521 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_28902 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.07 OrthoFinder output from all 47 species
Gb_29466 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_29995 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.08 OrthoFinder output from all 47 species
Gb_30523 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.07 OrthoFinder output from all 47 species
Gb_31111 EMB2758 Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
Gb_31702 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_33210 OTP84 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_33311 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Gb_33335 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.08 OrthoFinder output from all 47 species
Gb_33959 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_35108 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Gb_35202 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_37802 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.06 OrthoFinder output from all 47 species
Gb_38301 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_39406 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_39440 CRR22 Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
Gb_40047 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.03 OrthoFinder output from all 47 species
LOC_Os02g50280.1 CRR22, LOC_Os02g50280 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.02 OrthoFinder output from all 47 species
LOC_Os07g07620.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
MA_10429371g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_123466g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_124868g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_135075g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_137736g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_138676g0010 EMB2261 RNA editing factor (ECD1) 0.02 OrthoFinder output from all 47 species
MA_16823g0010 CRR22 RNA editing factor (MEF19) 0.03 OrthoFinder output from all 47 species
MA_178429g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_24849g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_2991g0010 No alias RNA editing factor (MEF12) 0.02 OrthoFinder output from all 47 species
MA_392600g0010 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.08 OrthoFinder output from all 47 species
MA_42343g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_50789g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 OrthoFinder output from all 47 species
MA_681272g0010 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
MA_68718g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
MA_75133g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_794605g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_81105g0010 REME1 RNA editing factor (OTP82) 0.07 OrthoFinder output from all 47 species
MA_8319g0010 CRR2 Pentatricopeptide repeat-containing protein At3g24000,... 0.08 OrthoFinder output from all 47 species
MA_86628g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_89214g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_95507g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Nbi_g06231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32180 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32352 EMB2758 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g41061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09990 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29795 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05273 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56969 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60900 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g065250.1.1 EMB2744, Solyc11g065250 Pentatricopeptide repeat-containing protein At5g39680... 0.05 OrthoFinder output from all 47 species
Spa_g04440 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11567 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14555 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16630 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33276 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Zm00001e031351_P001 EMB2261, Zm00001e031351 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Zm00001e034445_P001 LPA66, Zm00001e034445 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 475 523
IPR002885 Pentatricopeptide_repeat 152 198
IPR002885 Pentatricopeptide_repeat 250 281
IPR002885 Pentatricopeptide_repeat 374 421
IPR032867 DYW_dom 648 772
IPR002885 Pentatricopeptide_repeat 314 341
IPR002885 Pentatricopeptide_repeat 550 573
IPR002885 Pentatricopeptide_repeat 449 474
IPR002885 Pentatricopeptide_repeat 283 312
No external refs found!