Aliases : EXPA8, ATHEXP ALPHA 1.11, EXP8, ATEXPA8, ATEXP8
Description : alpha-class expansin
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_01501 | |
| Cluster | HCCA: Cluster_115 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00146900 | ATHEXP BETA 3.1,... | Cell wall.cell wall proteins.expansins.beta-like-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| AT1G12560 | ATEXP7, EXPA7,... | expansin A7 | 0.02 | OrthoFinder output from all 47 species | |
| AT1G62980 | EXPA18, EXP18,... | expansin A18 | 0.02 | OrthoFinder output from all 47 species | |
| AT2G20750 | EXPB1, ATEXPB1,... | expansin B1 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G45960 | ATEXLA3, EXPL3,... | expansin-like A3 | 0.01 | OrthoFinder output from all 47 species | |
| AT4G01630 | ATHEXP ALPHA... | expansin A17 | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g32589 | ATHEXP BETA 1.4,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g52111 | EXPA16, ATHEXP... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g20979 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g41940 | ATEXP14, EXPA14,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.26G037600.1 | ATEXPA3, EXP3,... | alpha-class expansin & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g25448 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g25635 | ATEXPA10,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g25653 | EXPA8, ATHEXP... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g26026 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g30387 | EXPA16, ATHEXP... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g41089 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50026 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01005917001 | ATHEXP BETA 3.1,... | Cell wall.cell wall proteins.expansins.beta-like-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01013208001 | ATHEXP BETA 3.1,... | Cell wall.cell wall proteins.expansins.beta-like-type expansin | 0.04 | OrthoFinder output from all 47 species | |
| Gb_01500 | EXPA8, ATHEXP... | alpha-class expansin | 0.05 | OrthoFinder output from all 47 species | |
| Gb_01505 | EXPA8, ATHEXP... | alpha-class expansin | 0.04 | OrthoFinder output from all 47 species | |
| Gb_06127 | EXP15, ATEXPA15,... | alpha-class expansin | 0.05 | OrthoFinder output from all 47 species | |
| Gb_34121 | ATEXPA4, ATEXP4,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g46630.1 | LOC_Os04g46630 | Expansin-B15 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g15690.1 | ATHEXP BETA 1.4,... | Expansin-B18 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429288g0020 | EXPA2, ATHEXP... | Expansin-A2 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_915221g0010 | ATEXPA1, EXP1,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g24230.1 | EXP15, ATEXPA15,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g03890.1 | ATEXPA1, EXP1,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g03970.1 | EXP15, ATEXPA15,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g28493 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo143857 | ATEXPA3, EXP3,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| Smo90332 | ATEXPA3, EXP3,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g007090.3.1 | Solyc08g007090 | Expansin-like B1 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g077330.3.1 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g077900.3.1 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g077910.3.1 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000038_P001 | ATHEXP BETA 1.4,... | Expansin-B7 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000429_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015336_P002 | ATHEXP BETA 1.1,... | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006020 | inositol metabolic process | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| MF | GO:0010333 | terpene synthase activity | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
| BP | GO:0019310 | inositol catabolic process | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044275 | cellular carbohydrate catabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| BP | GO:0046164 | alcohol catabolic process | IEP | HCCA |
| BP | GO:0046174 | polyol catabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0050113 | inositol oxygenase activity | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | HCCA |
| No external refs found! |
