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  5. Gb_01592

Gb_01592


Description : Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana (sp|o23266|pp308_arath : 614.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01592

Target Alias Description ECC score Gene Family Method Actions
Adi_g003733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022187 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05713 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30770 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27844 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18162 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03412.t2 Aspi01Gene03412 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66052.t1 Aspi01Gene66052 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0116.g046409 No alias not classified & original description: CDS=1-603 0.06 OrthoFinder output from all 47 species
Cba_g05154 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g09310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g63697 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G013300.1 Ceric.13G013300 not classified & original description: pacid=50635860... 0.04 OrthoFinder output from all 47 species
Dac_g18037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17105 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g08457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g15670.1 LOC_Os06g15670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g08358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34134 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57720 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15551 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g17690 LPA66 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g12725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09944 MEF22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g63825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03722 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g19871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000718 No alias not classified & original description: CDS=152-1756 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006578 No alias not classified & original description: CDS=156-2555 0.05 OrthoFinder output from all 47 species
Sam_g19039 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g27130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 132 179
IPR002885 Pentatricopeptide_repeat 263 311
IPR002885 Pentatricopeptide_repeat 365 411
IPR002885 Pentatricopeptide_repeat 207 234
IPR002885 Pentatricopeptide_repeat 235 261
IPR002885 Pentatricopeptide_repeat 339 364
IPR032867 DYW_dom 538 662
IPR002885 Pentatricopeptide_repeat 432 464
No external refs found!