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  5. Gb_02445

Gb_02445


Description : xylogen-type arabinogalactan protein


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02445
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01773p00009760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT1G62790 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
Dac_g12195 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04455 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11056 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g37280.1 LOC_Os11g37280 Non-specific lipid-transfer protein C6 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g37455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e010812_P001 Zm00001e010812 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011462_P001 Zm00001e011462 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e032912_P001 Zm00001e032912 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 33 124
No external refs found!